SAMEA3302625

EXTERNAL
Sample
Accession
SAMEA3302625
Alias
TZ-11
Sex
Male
Center
Description
simons_data_sample_297
Source publications
Y-DNA pathway R-Y27961
From de-novo tree placement
  1. Y
    245509 245509 ybp
  2. A0-T
    A2594, A2614, A2646, A2662, A2722, A2743, A2744, A2752, A2757, A2758, A2788, A2789, A2797, A2806, A2846, A2855, A2859, A2868, A2873, A2879, A2882, A2894, A2906, A2934, A2935, A2937, A2943, A2944, A2949, A2950, A2979, A2981, A2989, A3079, A3085, A4461, A4748, A5111, DU00186, DU00210, DU00221, DU00834, DU01556, DU02438, DU02444, DU02446, DU02455, DU02474, DU02479, DU02481, DU02482, DU02490, DU02500, DU02501, DU02505, DU02507, DU02511, DU02513, DU02516, DU02518, DU02529, DU02535, DU02540, DU02543, DU02550, DU02551, DU02559, DU02560, DU02568, DU02570, DU02572, DU02574, DU02600, DU02611, DU02618, DU02621, DU02622, DU02627, DU02629, DU02630, DU02641, DU02642, DU02656, DU02660, DU02665, DU02675, DU02678, DU02694, DU02697, DU02701, DU02704, DU02724, DU02726, DU02727, DU02734, DU02739, DU02741, DU02744, DU02747, DU02748, DU05466, DU05468, DU05475, DU05845, DU05941, DU06109, DU06117, DU06120, DU06573, DU06782, DU06784, DU06808, DU06815, DU06821, DU06824, DU06836, DU06847, DU06852, DU06853, DU06858, DU06859, DU06860, DU06891, DU06897, DU06903, DU06905, DU06913, DU06916, DU06924, DU06925, DU06950, DU06952, DU06960, DU06968, DU06991, DU06995, DU07000, DU07005, DU07006, DU07021, DU07023, DU07162, DU07170, DU07179, DU07180, DU07182, DU07183, DU07184, DU07188, DU07190, DU07191, DU07203, DU07204, DU07205, DU07206, DU07208, DU07209, DU07216, DU07217, DU07230, DU07234, DU07236, FGC24703, FGC24753, FGC24763, FGC24769, FGC24775, FGC24777, FGC24781, FGC24792, FGC24794, FGC24800, FGC24809, FGC24824, FGC24833, FGC24998, FGC25061, FGC25066, FGC25163, FGC25194, FGC25307, FGC25328, FGC25366, FGC25379, FGC25394, FGC25403, FGC25418, FGC25442, FGC25450, FGC25452, FGC25454, FGC25464, FGC25465, FGC25470, FGC25479, FGC25482, FGC25536, FGC25541, FGC25543, FGC25544, FGC25557, FGC25562, FGC25583, FGC25588, FGC25590, FGC25615, FGC25656, FGC25660, FGC25688, FGC25695, FGC25771, FGC25784, FGC25797, FGC25803, FGC25813, FGC25815, FGC25816, FGC25830, FGC25849, FGC25853, FGC25860, FGC25864, FGC25865, FGC25866, FGC25874, FGC25887, FGC25902, FGC25909, FGC25926, FGC25943, FGC25945, FGC25962, FGC26020, FGC26132, FGC26139, FGC26182, FGC26187, FGC26188, FGC26192, FGC26197, FGC26237, FGC26238, FGC26277, FGC26279, FGC26280, FGC26289, FGC26298, FGC26341, FGC26343, FGC26356, FGC26370, FGC26375, FGC26390, FGC26406, FGC26410, FGC26423, FGC26431, FGC26434, FGC26435, FGC26439, FGC26453, FGC26455, FGC26462, FGC26470, FGC26472, FGC26492, FGC26493, FGC26501, FGC26502, FGC26514, FGC26528, FGC26531, FGC26561, FGC26577, FGC26578, FGC26591, FGC26627, FGC26633, FGC26634, FGC26637, FGC26639, FGC26648, FGC26653, FGC26660, FGC26675, FGC26682, FGC26697, FGC26712, FGC26735, FGC26737, FGC26760, FGC26779, FGC26795, FGC26817, FGC26818, FGC26829, FGC26833, FGC26841, FGC26845, FGC26850, FGC26868, FGC26871, FGC26897, FGC26959, FGC26969, FGC26987, FGC27007, FGC27025, FGC27035, FGC27037, FGC27046, FGC27050, FGC27063, FGC27064, FGC27067, FGC27077, FGC27087, FGC27093, FGC27103, FGC27107, FGC27112, FGC27115, FGC27136, FGC27145, FGC27153, FGC27155, FGC27198, FGC27206, FGC27215, FGC27228, FGC27255, FGC27262, FGC27300, FGC27302, FGC27345, FGC27372, FGC27381, FGC27394, FGC27408, FGC27410, FGC27412, FGC27419, FGC27443, FGC27460, FGC27476, FGC27477, FGC27486, FGC27497, FGC27501, FGC27502, FGC27506, FGC27527, FGC27538, FGC27542, FGC27555, FGC27557, FGC27576, FGC27583, FGC27593, FGC27695, FGC27698, FGC27704, FGC27710, FGC27721, FGC27728, FGC27730, FGC27733, FGC27734, FGC27736, FGC27738, FGC27752, FGC27771, FGC27774, FGC27782, FGC27785, FGC27793, FGC27795, FGC27820, FGC27826, FGC27834, FGC27871, FGC27878, FGC27884, FGC27886, FGC27910, FGC27913, FGC27917, FGC27918, FGC27921, FGC27922, FGC27924, FGC27929, FGC27936, FGC27948, FGC27968, FGC27969, FGC27971, FGC27974, FGC28010, FT97438, L1090, L1098, L1099, L1101, L1116, L1118, L1120, L1123, L1127, L1129, L1130, L1132, L1135, L1142, L1143, L1145, L1150, PR4010, V1038, V1054, V1070, V1138, V1165, V1171, V1193, V1201, V1222, V1230, V1238, V1285, V1291, V1298, V1411, V1432, V1447, V1467, V1475, V1479, V1537, V1560, V1566, V1573, V1579, V1634, V1675, V1711, V1826, V1833, V1896, V1941, V2086, V2132, V2152, V2188, V2241, V2247, V2432, V2452, V2490, V2628, V2657, V2666, V2730, V2765, V2819, V2828, V2887, V2938, V2961, V2989, V3033, V3035, V3112, V3131, V3328, V3437, V3454, V3470, V3484, V3593, V3630, V3754, V3762, V3765, V3809, V3810, V3819, V3886, V3894, V3906, V3967, V3970, V3987, V4021, V4044, V4047, V4060, V4071, V4119, V4129, V4151, V4172, V4195, V4375, V4421, V4492, V4549, V4567, V4582, V4622, V4673, V4676, V4942, V4955, V4981, V5000, V5024, V5028, V5077, V5094, V5209, V5219, V5231, V5380, V5482, V5511, V5512, V5519, V5545, V5546, V5561, V5566, V5584, V5595, V5628, V5947, V5957, V5975, V5990, V6008, V6027, V6053, V6068, V6102, V6126, V6142, V6184, V6189, V6192, V6230, V6240, V6296, V6362, V6492, V6493, V6566, V6585, V6637, V6644, V6663, V6680, V6723, V6743, V6754, V6757, V6784, V6785, V6822, V6863, V6900, V6906, V6915, V6920, V7024, V7027, V7029, V7086, V7470, V7487, V7495, V7496, V7506, V7517, V7539, V7556, V7613, V7623, V7673, V7684, V7691, V7702, V7725, V7804, V7871, V7887, V7941, V7966, V7995, V8003
    221532 163352 ybp
  3. A1
    A4698, A4733, A4739, A4762, A4825, A4826, A4951, BY145693, DU00226, DU00336, DU00345, DU00907, DU01110, DU01277, DU01311, DU01501, DU01807, DU02412, DU02441, DU02453, DU02473, DU02475, DU02476, DU02534, DU02542, DU02554, DU02564, DU02565, DU02581, DU02583, DU02589, DU02693, DU02703, DU02717, DU02745, DU05463, DU05472, DU05673, DU06108, DU06127, DU06128, DU06131, DU06135, DU06136, DU06774, DU06775, DU06778, DU06779, DU06790, DU06802, DU06805, DU06814, DU06816, DU06864, DU06865, DU06870, DU06877, DU06878, DU06879, DU06886, DU06887, DU06907, DU06908, DU06910, DU06926, DU06928, DU06929, DU06938, DU06951, DU06958, DU06963, DU06986, DU06993, DU06997, DU07002, DU07004, DU07013, DU07015, DU07028, DU07029, DU07159, DU07161, DU07175, DU07189, DU07228, FGC24678, FGC24722, FGC24725, L1002, L1004, L1005, L1084, L985, L986, P305, V1130, V1360, V1522, V168, V1793, V1808, V2049, V2070, V2349, V2368, V238, V241, V250, V2613, V2732, V2842, V2843, V2980, V3222, V3315, V3624, V3653, V3682, V3711, V3832, V3937, V3955, V4189, V4411, V4437, V4508, V4581, V5229, V6309, V6360, V6435, V6476, V6594, V6632, V6659, V7529, V7895, V7964, Z7768, Z8464, Z8553, Z8555, Z8559, Z8723, Z8757, Z8772, Z8773, Z8784, Z8787, Z8794, Z8802, Z8807, Z8809, Z8824, Z8829, Z8830, Z8834, Z8839, Z8883, Z8892, Z8903, Z8925, Z8983, Z9014, Z9033, Z9047, Z9116, Z9128, Z9164, Z9185, Z9186, Z9292, Z9301, Z9309, Z9353, Z9360, Z9418, Z9446, Z9457, Z9467, Z9495, Z9523, Z9569, Z9574, Z9590, Z9616, Z9619, Z9629, Z9636, Z9641, Z9648, Z9649, Z9661, Z9719, Z9749, Z9789, Z9795, Z9796, Z9808, Z9820, Z9830, Z9832, Z9840, Z9859, Z9874
    152141 132724 ybp
  4. A1b
    DU01149, DU02506, DU02632, DU02636, DU02728, DU05454, DU05476, DU06106, DU06119, DU06572, DU06844, DU06851, DU06861, DU06867, DU06898, DU06906, DU06918, DU06940, DU06949, DU06961, DU06964, DU06998, DU07009, DU07047, FGC24598, FGC24604, FGC24611, FGC24616, FGC24627, L1009, L1013, L1053, L989, P108, V1820, V221, V2590, V3785, V4076, Y8279, Z11891, Z11899, Z11900, Z11906, Z11907, Z11910, Z11913, Z11916, Z11918, Z11919, Z17892, Z17895, Z17896, Z17897
    130265 125244 ybp
  5. BT
    DU02528, M299, M42, M9118, M9336, M94, PF1284, PF6234
    117150 116364 ybp
  6. CT
    A4776, CTS11575, CTS5457, CTS7295, DU00344, DU00349, DU00510, DU01057, DU01121, DU01173, DU01205, DU01216, DU01622, DU02411, DU02431, DU02432, DU02442, DU02443, DU02445, DU02447, DU02449, DU02450, DU02469, DU02480, DU02486, DU02508, DU02517, DU02519, DU02526, DU02530, DU02531, DU02539, DU02545, DU02552, DU02555, DU02580, DU02582, DU02586, DU02590, DU02598, DU02601, DU02603, DU02604, DU02605, DU02610, DU02614, DU02617, DU02628, DU02639, DU02651, DU02653, DU02661, DU02672, DU02702, DU02706, DU02735, DU02742, DU05451, DU05452, DU05455, DU05458, DU05462, DU05474, DU05478, DU05480, DU05481, DU06124, DU06125, DU06133, DU06134, DU06227, DU06551, DU06571, DU06730, DU06765, DU06770, DU06776, DU06781, DU06788, DU06793, DU06794, DU06796, DU06798, DU06799, DU06801, DU06806, DU06811, DU06817, DU06822, DU06828, DU06829, DU06830, DU06839, DU06841, DU06842, DU06846, DU06848, DU06849, DU06855, DU06866, DU06872, DU06873, DU06882, DU06888, DU06892, DU06893, DU06894, DU06895, DU06896, DU06899, DU06914, DU06927, DU06932, DU06935, DU06942, DU06947, DU06982, DU06989, DU06994, DU07007, DU07010, DU07012, DU07014, DU07016, DU07017, DU07018, DU07025, DU07027, DU07157, DU07158, DU07163, DU07172, DU07174, DU07178, DU07187, DU07193, DU07194, DU07198, DU07199, DU07211, DU07212, DU07214, DU07227, DU07233, DU07281, DU07284, DU07286, FGC24511, FGC24531, FGC25345, L1492, M11839, M168, M294, M5576, M5577, M5585, M5587, M5588, M5589, M5591, M5597, M5599, M5601, M5603, M5605, M5606, M5607, M5608, M5609, M5610, M5611, M5612, M5613, M5614, M5615, M5616, M5617, M5618, M5619, M5620, M5622, M5624, M5625, M5626, M5627, M5628, M5629, M5631, M5632, M5633, M5636, M5639, M5640, M5641, M5643, M5648, M5650, M5651, M5652, M5655, M5656, M5660, M5661, M5662, M5669, M5671, M5675, M5676, M5679, M5680, M5681, M5682, M5683, M5684, M5690, M5691, M5694, M5695, M5698, M5699, M5706, M5707, M5708, M5711, M5712, M5713, M5715, M5716, M5719, M5721, M5723, M5724, M5726, M5730, M5737, M5741, M5745, M5747, M5749, M5750, M5751, M5752, M5754, M5756, M5757, M5758, M5760, M5762, M5765, M5766, M5769, M5770, M5771, M5774, M5775, M5777, M5778, M5781, M5782, M5783, M5784, M5785, M5786, M5788, M5790, M5794, M5795, M5796, M5797, M5800, M5808, M5814, M5817, M5819, M5821, M5822, M5823, M8948, M9022, P9, PF1016, PF228, PF316, PF342, PF500, PF667, V2472, V3858, Y1455, Y1526, Y1817, Z17711
    105901 78107 ybp
  7. CF
    M3727, P143
    77339 77045 ybp
  8. F
    CTS3868, CTS7981, DU00219, DU00220, DU00939, DU01072, DU01073, DU01109, DU01262, DU01451, DU01644, DU02454, DU02465, DU02512, DU02523, DU02533, DU02556, DU02562, DU02567, DU02595, DU02596, DU02612, DU02613, DU02615, DU02623, DU02646, DU02648, DU02664, DU02673, DU02676, DU02725, DU02731, DU02732, DU05477, DU05727, DU05731, DU06729, DU06780, DU06783, DU06823, DU06831, DU06835, DU06840, DU06869, DU06876, DU06889, DU06901, DU06902, DU06920, DU06921, DU06934, DU06936, DU06955, DU06957, DU06962, DU06965, DU06990, DU06992, DU07019, DU07171, DU07195, DU07200, DU07215, DU07225, DU07232, DU07262, DU07283, F1046, F1089, F1149, F1209, F1285, F1320, F1416, F1704, F1714, F1753, F1767, F2142, F2155, F2245, F773, IMS-JST1552, IMS-JST305, L132, L313, L350, L352, L468, L498, L851, L882, M3637, M3650, M3686, M3696, M3701, M3722, M3723, M3735, M3736, M3742, M3767, M3771, M89, P133, P134, P135, P136, P138, P14, P140, P141, P145, P146, P148, P149, P151, P157, P158, P160, P161, P163, P166, P187, P316, PF1914, PF2591, PF2608, PF2611, PF2613, PF2615, PF2627, PF2628, PF2629, PF2631, PF2639, PF2643, PF2647, PF2662, PF2666, PF2667, PF2671, PF2693, PF2695, PF2722, PF2732, PF2736, PF2737, PF2739, PF2742, PF2747, PF2748, PF2749, PF2750, PF2758, PF2772, Page38, Page80, V205, Y1463, YSC1298, YSC1308
    72917 57455 ybp
  9. GHIJK
    M3658
    57466 57267 ybp
  10. HIJK
    DU00852, M578
    57188 56897 ybp
  11. IJK
    A3081, A4761, A4763, DU06911, DU07003, L1235, L15, L16, M2682, M2683, M2696, PR2921, V2495, V2663, V2909, V3596, V5381, YP1879, YSC1319
    56698 56019 ybp
  12. K
    CTS2071, DU02645, DU05469, DU06123, DU06786, DU06912, F2006, F2548, L819, M2351, M2685, M2689, M2694, M2695, M9, P128, P131, P132, V104
    56156 54202 ybp
  13. K-M526
    A4747, DU06103, M526
    54315 54117 ybp
  14. K-YSC0000186
    DU02464, DU02770, DU06915, YSC186
    54026 53735 ybp
  15. P
    CTS12299, DU00270, DU01012, DU01128, DU01495, DU02437, DU02483, DU02484, DU02485, DU02491, DU02497, DU02537, DU02563, DU02579, DU02584, DU02585, DU02593, DU02609, DU02616, DU02635, DU02659, DU02669, DU02670, DU02681, DU02695, DU02712, DU02720, DU02733, DU02746, DU05473, DU06130, DU06575, DU06576, DU06577, DU06797, DU06800, DU06807, DU06809, DU06810, DU06813, DU06818, DU06826, DU06832, DU06838, DU06854, DU06875, DU06880, DU06881, DU06883, DU06890, DU06904, DU06909, DU06922, DU06948, DU06966, DU06983, DU07001, DU07011, DU07024, DU07026, DU07155, DU07223, DU07266, DU07268, DU07301, F1660, F4, F506, F640, F653, FGC285, FGC83, L268, L536, L721, L741, L768, L781, L82, M1103, M1109, M1160, M1184, M1185, M1186, M1188, M1189, M1190, M1191, M1192, M1193, M1195, M1196, M1198, M1199, M1202, M1204, M1210, M1211, M1212, M1214, M1215, M1216, M1218, M1219, M1222, M1224, M1225, M1226, M1227, M1228, M1229, M1231, M1232, M1235, M1239, M1240, M1241, M1248, M1250, M1252, M1255, M1256, M1258, M1260, M1263, M1264, M1265, M1267, M1269, M1272, M1273, M1274, M45, M5579, N12, P207, P228, P235, P237, P239, P240, P243, P244, P281, P282, P283, P284, P295, PF5471, PF5483, PF5511, PF5867, PF5882, PF5982, PF5999, Page83, V1079, V231, V2974, V5158, V7434, Y451
    50961 35990 ybp
  16. R
    CTS3622, DU01100, DU02488, DU02515, DU02592, DU02606, DU02710, DU06578, DU06772, DU06773, DU06795, DU06874, DU06953, DU06999, DU07156, FGC204, FGC209, FGC214, M207, M603, M607, M613, M614, M620, M628, M642, M667, M702, M703, M705, M734, M764, M789, M792, M805, P224, P229, P232, P280, P285, SK2006
    33223 29587 ybp
  17. R-M173
    DU00260, DU02503, DU02514, DU02541, DU02599, DU06129, DU06981, DU06985, DU07213, M621, M706, M711, M781, M785, MF16853, P233, P234, P236, P238, P242, P245, P286, PAGES29, PF5997, S1, V5063, YSC182
    27073 24423 ybp
  18. R-M343
    A702, DU02498, DU02624, DU06151, DU06785, DU06820, DU06871, DU06988, DU06996, DU07285, F1811, FGC36, L1345, L278, L506, L754, L761, L774, L822, M12190, M343, MF795714, P25, PF6249, PF6259, PF6263, PF6270, PF6271, PF6272, V1532, V1980, V4199, YSC1279
    21961 19016 ybp
  19. R-L389
    L388, L389
    18550 18257 ybp
  20. R-P297
    CTS10834, CTS11468, CTS11985, CTS12478, CTS2466, CTS2664, CTS3575, CTS6832, CTS7400, CTS7659, CTS8591, CTS8627, CTS8665, DU00365, DU02494, DU02527, DU02558, DU02594, DU02607, DU02633, DU02643, DU02680, DU02723, DU05450, DU05457, DU05479, DU06122, DU06771, DU06777, DU06787, DU06819, DU06827, DU06837, DU06843, DU06856, DU06863, DU06884, DU06900, DU06923, DU06930, DU06939, DU06959, DU07160, DU07168, DU07173, DU07192, DU07196, DU07231, DU07267, DU07300, F1794, FGC37, FGC76, L1063, L1348, L1350, L150, L265, L407, L479, L482, L500, L502, L585, L749, L752, L753, L762, M12189, M269, M8208, PF6265, PF6406, PF6409, PF6425, PF6426, PF6428, PF6429, PF6430, PF6434, PF6435, PF6438, PF6443, PF6444, PF6448, PF6463, PF6466, PF6485, PF6494, PF6495, PF6497, PF6498, PF6500, PF6504, PF6506, PF6507, PF6508, PF6509, PF6518, PF6524, PF6525, S10, S17, V1699, V1741, V3721, V3993, YSC167, YSC213, YSC294
    16348 6499 ybp
  21. R-L23
    DU06792, L23, L478
    6293 5911 ybp
  22. R-L51
    DU06954, DU07020, E207, L51
    5863 5484 ybp
  23. R-P310
    DU02472, DU02679, DU06010, FGC44, L11, L151, L52, P310, P311, PF6540, PF6543
    5798 4837 ybp
  24. R-P312
    DU06132, MF42709, P312
    5028 4759 ybp
  25. R-DF27
    DF27
    4933 4759 ybp
  26. R-Z195
    DU12206, S227
    4378 4186 ybp
  27. R-Z198
    DU12722, S228
    4129 3942 ybp
  28. R-DU15531
    DU15531
    3746 3746 ybp
  29. R-Z292
    Y964, Z292
    3731 3731 ybp
  30. R-BY3214
    CTS11486, CTS9774, CTS9993, FT14378, FT14382, FT318801, Y16881, Y16882, Y16883, Y16965, Y24672, Y26643, Y27960, Y27987
    4261 2810 ybp
  31. R-Y27961
    Y27961, Y27962, Y79943
    2898 2519 ybp
mtDNA pathway HV
From de-novo tree placement
  1. L1'2'3'4'5'6'7
    chrM:16181G>A
  2. L2'3'4'5'6'7
    chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
  3. L2'3'4'6
    chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
  4. L3'4
    chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
  5. L3
    chrM:193A>G, chrM:442A>G
  6. N
    chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
  7. R
    chrM:15646T>C
  8. HV
    chrM:11142A>G, chrM:14189T>C
Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files
Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 660891247 · Read length: — · Date: 2016-05-03
File Format Size Reference Aligner md5
ERR1395617_1.fastq.gz FASTQ 59.2 GB 5fef07a9d0b63cea19b8ef92a8e82744 Download
ERR1395617_2.fastq.gz FASTQ 58.0 GB e14af8c732b5584551b918c497f425e8 Download
Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.