Coverage Benchmarks

Per-chromosome sequencing benchmarks aggregated across the federated cohort. Each figure is an average with its coefficient of variation (CV = σ/µ) across contributing samples.

Dante Labs HiFi 10Gbases Build: chm13v2.0

Chr	Samples	Callable loci		Mean depth		Poor alignment		Total loci		Est. years/SNP
Chr	Samples	Avg	CV	Avg	CV	Avg	CV	Avg	CV	Est. years/SNP
`chrY`	1	22,777,581	—	1.6×	—	14,948,026	—	62,460,029	—	53 yr

Dante Labs WGS150 90Gbases Build: chm13v2.0

Chr	Samples	Callable loci		Mean depth		Poor alignment		Total loci		Est. years/SNP
Chr	Samples	Avg	CV	Avg	CV	Avg	CV	Avg	CV	Est. years/SNP
`chrY`	1	16,570,178	—	12.0×	—	43,936,537	—	62,460,029	—	72 yr

Full Genomes Corporation Y-Elite Build: chm13v2.0

Chr	Samples	Callable loci		Mean depth		Poor alignment		Total loci		Est. years/SNP
Chr	Samples	Avg	CV	Avg	CV	Avg	CV	Avg	CV	Est. years/SNP
`chrY`	1	14,842,675	—	31.6×	—	32,431,487	—	62,460,029	—	81 yr

YSEQ WGS150 90Gbases Build: chm13v2.0

Chr	Samples	Callable loci		Mean depth		Poor alignment		Total loci		Est. years/SNP
Chr	Samples	Avg	CV	Avg	CV	Avg	CV	Avg	CV	Est. years/SNP
`chrY`	1	16,609,335	—	12.0×	—	44,343,822	—	62,460,029	—	72 yr