SAMN33621961

EXTERNAL

Sample

Accession

SAMN33621961

Alias

NA18971_lib1

Center

UCSC GI

Description

PacBio HiFi sequencing of NA18971

Source publications

A draft human pangenome reference (2023)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway

No haplogroup call for this sample.

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Sequel II · Layout: SINGLE · Reads: 5613400 · Read length: — · Date: 2023-03-09

File	Format	Size	Reference	Aligner	md5
SRR23732282_subreads.fastq.gz	FASTQ	80.5 GB	—	—	295a126c93e627f129e374d430409397	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 78421851 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242515_1.fastq.gz	FASTQ	5.8 GB	—	—	874b4ca6fd29a93665aadcbfeba49e5c	Download
SRR30242515_2.fastq.gz	FASTQ	6.0 GB	—	—	3191880511eebc8e92f492f51250478e	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 74886100 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242519_1.fastq.gz	FASTQ	5.5 GB	—	—	3c2c4a4916b7b31400bf5822cf7f694d	Download
SRR30242519_2.fastq.gz	FASTQ	5.8 GB	—	—	3cc772cb69a0d324702406378720bfdb	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 78680165 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242520_1.fastq.gz	FASTQ	5.8 GB	—	—	42044376656c4a79bc5541f3a0081f67	Download
SRR30242520_2.fastq.gz	FASTQ	6.0 GB	—	—	7f551ca1357b19d2338fe968e21b41c6	Download

Instrument: Revio · Layout: SINGLE · Reads: 2391474 · Read length: — · Date: 2025-05-23

File	Format	Size	Reference	Aligner	md5
SRR33616462_subreads.fastq.gz	FASTQ	18.4 GB	—	—	a62067aded74800817ed738bb15d1bfa	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 74238251 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242514_1.fastq.gz	FASTQ	5.5 GB	—	—	bbbbe59249e127a07115b05d7f02e046	Download
SRR30242514_2.fastq.gz	FASTQ	5.8 GB	—	—	721c0231d07baefd20697b1527ab5694	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 76571454 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242516_1.fastq.gz	FASTQ	5.6 GB	—	—	2a37ad29b0115c8f0240d7a4ab3cc959	Download
SRR30242516_2.fastq.gz	FASTQ	5.9 GB	—	—	7731ab8e6dd5be6c089338773775e1f1	Download

Instrument: Revio · Layout: SINGLE · Reads: 2284487 · Read length: — · Date: 2025-05-23

File	Format	Size	Reference	Aligner	md5
SRR33616461_subreads.fastq.gz	FASTQ	18.1 GB	—	—	a8a2f1302afc5c0f64f38c99af90ca6a	Download

Instrument: PromethION · Layout: SINGLE · Reads: 10652648 · Read length: — · Date: 2023-10-29

File	Format	Size	Reference	Aligner	md5
SRR26373408_1.fastq.gz	FASTQ	80.8 GB	—	—	b80fe00f6635e99e3b6d9221140410b6	Download

Instrument: Sequel II · Layout: SINGLE · Reads: 6356613 · Read length: — · Date: 2023-10-29

File	Format	Size	Reference	Aligner	md5
SRR26545312_subreads.fastq.gz	FASTQ	93.0 GB	—	—	e6fae9be197771edf666201603ed210d	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 76058880 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242513_1.fastq.gz	FASTQ	5.6 GB	—	—	071ebb855a8d66fbc382d9d25e0dcca6	Download
SRR30242513_2.fastq.gz	FASTQ	5.8 GB	—	—	96b4e7bed0609dc9e1ce897eb706dd57	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 76907759 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242518_1.fastq.gz	FASTQ	5.6 GB	—	—	5348e55968c1ceea37ff0e16e44c1912	Download
SRR30242518_2.fastq.gz	FASTQ	5.8 GB	—	—	ce018bf7a0ae5c8dd1c9ef32053d703a	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 76684322 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242521_1.fastq.gz	FASTQ	5.6 GB	—	—	a8ca80ddf8b456e562e55e118381e1d6	Download
SRR30242521_2.fastq.gz	FASTQ	5.9 GB	—	—	4ff55dee0f06b42e996e2d863700c378	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.