SAMN33621960

EXTERNAL

Sample

Accession

SAMN33621960

Alias

NA18612_lib1

Center

UCSC GI

Description

PacBio HiFi sequencing of NA18612

Source publications

A draft human pangenome reference (2023)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway

No haplogroup call for this sample.

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 68733345 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242162_1.fastq.gz	FASTQ	5.1 GB	—	—	078bc240a6e4b32311931c999a174fbb	Download
SRR30242162_2.fastq.gz	FASTQ	5.4 GB	—	—	8a0f18ae286c312b5324c214b7bf0bb5	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 69711805 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242213_1.fastq.gz	FASTQ	5.1 GB	—	—	592a35f4296e4a0504d813fbf787fd7f	Download
SRR30242213_2.fastq.gz	FASTQ	5.4 GB	—	—	d993a4c6102f2e95b3ee111b3e6e3992	Download

Instrument: Revio · Layout: SINGLE · Reads: 1740913 · Read length: — · Date: 2025-05-23

File	Format	Size	Reference	Aligner	md5
SRR33616460_subreads.fastq.gz	FASTQ	12.8 GB	—	—	bf50aa45fd5e80789fb06ca7f4e876ff	Download

Instrument: Sequel II · Layout: SINGLE · Reads: 6560371 · Read length: — · Date: 2023-10-28

File	Format	Size	Reference	Aligner	md5
SRR26545315_subreads.fastq.gz	FASTQ	90.0 GB	—	—	a96b57acdbaa74de3019b944a6d020b5	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 95970844 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242214_1.fastq.gz	FASTQ	7.0 GB	—	—	0dfe1ead2e4f5f496abcc7719f2967e3	Download
SRR30242214_2.fastq.gz	FASTQ	7.3 GB	—	—	c466ea1cbcbade0c34877c3d705f5ea5	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 94474484 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242215_1.fastq.gz	FASTQ	7.0 GB	—	—	29cf5e3617e3c9555c890f9925ca1c5e	Download
SRR30242215_2.fastq.gz	FASTQ	7.3 GB	—	—	4019134eee3e6a2d48ef7f698e5a6222	Download

Instrument: Sequel II · Layout: SINGLE · Reads: 5841587 · Read length: — · Date: 2023-03-09

File	Format	Size	Reference	Aligner	md5
SRR23732284_subreads.fastq.gz	FASTQ	76.7 GB	—	—	3a53b9bec6dc13c40183cfdeae5d4e9c	Download

Instrument: PromethION · Layout: SINGLE · Reads: 7995862 · Read length: — · Date: 2023-10-15

File	Format	Size	Reference	Aligner	md5
SRR26373409_1.fastq.gz	FASTQ	72.0 GB	—	—	9ad4cfab621e1eb96bb529077300778b	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 70237950 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242161_1.fastq.gz	FASTQ	5.1 GB	—	—	aab69bca963d2c5d593f6c213a03ea3c	Download
SRR30242161_2.fastq.gz	FASTQ	5.4 GB	—	—	e1c353ad01f554e6fbf63b60d6767f9a	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 71456013 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242170_1.fastq.gz	FASTQ	5.2 GB	—	—	e8687b182568b7cd7291dbf2f81b4d91	Download
SRR30242170_2.fastq.gz	FASTQ	5.5 GB	—	—	6c9a53827494eb40c7c5020cb51a0b40	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 98549511 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242173_1.fastq.gz	FASTQ	7.2 GB	—	—	8dc7824c0dd78cb353995b3d115d9ef6	Download
SRR30242173_2.fastq.gz	FASTQ	7.5 GB	—	—	52eededae1eaf4c914fdc97f8eb61bf6	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 96330397 · Read length: — · Date: 2024-08-25

File	Format	Size	Reference	Aligner	md5
SRR30242174_1.fastq.gz	FASTQ	7.0 GB	—	—	f88b969dc63833eacf22acef3fafacc1	Download
SRR30242174_2.fastq.gz	FASTQ	7.4 GB	—	—	e6485bc0604e2c27143068a807ee2c92	Download

Instrument: Revio · Layout: SINGLE · Reads: 1676690 · Read length: — · Date: 2025-05-23

File	Format	Size	Reference	Aligner	md5
SRR33616459_subreads.fastq.gz	FASTQ	13.0 GB	—	—	d72e3d04cb7436844dbb6d14b9d1c7dc	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.