SAMN02687908

EXTERNAL

Sample

Accession

SAMN02687908

Alias

CO1

Sex

Female

Center

UCD - TCD Ireland

Description

CO1 - Ancient Hungarian genome -Copper Age - CO1

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: SINGLE · Reads: 13963 · Read length: — · Date: 2014-11-13

File	Format	Size	Reference	Aligner	md5
SRR1187906.fastq.gz	FASTQ	446.9 KB	—	—	efc2c3389650c04852958ab5aebb55cd	Download

Instrument: Illumina HiSeq 2000 · Layout: SINGLE · Reads: 58987579 · Read length: — · Date: 2014-11-13

File	Format	Size	Reference	Aligner	md5
SRR1187905.fastq.gz	FASTQ	2.3 GB	—	—	77b6a73016878e878936c5729fb93612	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.