SAMN01096793

EXTERNAL

Sample

Accession

SAMN01096793

Alias

HG03963

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual HG03963

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:5875C>T

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M39
chrM:15361C>T, chrM:16050T>A, chrM:8102A>G
M39b
chrM:1235A>G, chrM:16058G>T, chrM:16145A>G, chrM:16478T>C
chrM:5875C>T
chrM:15868T>C, chrM:15942C>T, chrM:16085A>G, chrM:16226A>G, chrM:5875C>T

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 901086852 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03963.final.cram	CRAM	—	GRCh38	bwa mem	b4c305ee3d79c791eb1e5a5a1653d3ef	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.