SAMN01096761

EXTERNAL

Sample

Accession

SAMN01096761

Alias

HG03947

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG03947

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway R7b2

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R7
chrM:12528A>G, chrM:15742G>A
chrM:866G>A
chrM:8474A>G, chrM:8533T>C, chrM:866G>A
R7a'b
chrM:13253T>C, chrM:15683C>T, chrM:15684C>T, chrM:15785T>C, chrM:15942C>T, chrM:5671T>C, chrM:7293T>C, chrM:9712A>G
R7b2
chrM:10803A>G, chrM:11807T>C, chrM:13487C>T, chrM:15734T>C, chrM:16187T>C, chrM:1706C>T, chrM:6733T>C, chrM:7134T>C, chrM:7980G>A, chrM:9389G>A

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 807511902 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03947.final.cram	CRAM	—	GRCh38	bwa mem	898800707df6ab16e1564a3d47ed81a4	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.