SAMN01096702

EXTERNAL

Sample

Accession

SAMN01096702

Alias

HG03937

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG03937

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:4660G>A

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R30
chrM:8007G>A
R30a1
chrM:10470C>A, chrM:12137T>C, chrM:14478T>C, chrM:1480G>A, chrM:2739G>A, chrM:3655T>C, chrM:4865T>C, chrM:6187G>A, chrM:8579A>G, chrM:8665A>G
R30a1b
chrM:15632T>C, chrM:3648A>G
chrM:6697C>T
chrM:10929T>C, chrM:15549T>C, chrM:15604A>G, chrM:15785T>C, chrM:6697C>T, chrM:9389G>A
chrM:4660G>A
chrM:4660G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 672416368 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03937.final.cram	CRAM	—	GRCh38	bwa mem	ab404ec523300c1acbcb03063fa464f4	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.