SAMN01090989

EXTERNAL

Sample

Accession

SAMN01090989

Alias

HG03750

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual HG03750

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway R31b

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R31b
chrM:11430G>A, chrM:12074G>A, chrM:13911T>C, chrM:13992G>A, chrM:14571G>A, chrM:15307G>A, chrM:15474A>G, chrM:15516T>C, chrM:15641C>T, chrM:15715C>T, chrM:15758A>G, chrM:16199G>A, chrM:16220G>A, chrM:16226A>G, chrM:2187T>C, chrM:3272G>A, chrM:3305G>A, chrM:4926T>C, chrM:6250T>C, chrM:6469A>G, chrM:733A>G, chrM:7823T>C, chrM:8411A>G, chrM:876T>C, chrM:9310T>C

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 773137292 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03750.final.cram	CRAM	—	GRCh38	bwa mem	27c59b83b35eabfe0c904972892e9238	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.