SAMN01090941

EXTERNAL

Sample

Accession

SAMN01090941

Alias

HG03796

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG03796

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway M50

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M50
chrM:11704C>T, chrM:13337C>T, chrM:14478T>C, chrM:1496A>G, chrM:15030A>G, chrM:15086T>C, chrM:15597C>T, chrM:15732A>G, chrM:15949G>A, chrM:16142C>T, chrM:16319A>G, chrM:16449C>T, chrM:2840C>T, chrM:5515T>C, chrM:6649G>A, chrM:807A>G, chrM:8225T>C, chrM:8653T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 727928608 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03796.final.cram	CRAM	—	GRCh38	bwa mem	674d9a8f12ad7ef99a552943d143d6ff	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.