SAMN01090913

EXTERNAL

Sample

Accession

SAMN01090913

Alias

HG03491

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG03491

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:2212C>T

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R6
chrM:11708T>C, chrM:15785T>C
R6a
chrM:10498T>C, chrM:13481C>T, chrM:15552G>A
R6a2
chrM:11556C>T, chrM:14490T>C, chrM:15636G>A
chrM:2212C>T
chrM:15682C>A, chrM:15697G>A, chrM:15742G>A, chrM:15813G>A, chrM:2212C>T, chrM:3875T>C, chrM:8007G>A, chrM:8312T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 755973418 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03491.final.cram	CRAM	—	GRCh38	bwa mem	abdd1b9dcb944e3e7a879fea34e993c1	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.