SAMN01090822
EXTERNALSample
- Accession
SAMN01090822- Alias
- HG03559
- Sex
- Male
- Center
- NYGC
- Description
- Human 1000 genomes individual HG03559
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
chrM:15822A>G
From de-novo tree placement
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
-
chrM:12528A>GchrM:12528A>G, chrM:15547T>C
-
L3d1'2'3'4'5'6chrM:13309T>C, chrM:13707C>T, chrM:345T>C, chrM:4570G>A, chrM:6847A>G, chrM:8041T>C
-
L3d1chrM:6103T>C
-
L3d1bchrM:4469G>A
-
chrM:16142C>T [Node1879]chrM:16142C>T
-
L3d1b1chrM:5695A>G
-
chrM:15822A>GchrM:15822A>G
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina NovaSeq 6000 ·
Layout: PAIRED ·
Reads: 738713746 ·
Read length: 150 ·
Date: 2020-05-14
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| HG03559.final.cram | CRAM | — | GRCh38 | bwa mem | 4ef60a2c4b46e7288c457ee2ac7cb985 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.