SAMN01090803

EXTERNAL

Sample

Accession

SAMN01090803

Alias

HG03437

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG03437

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:1647A>G

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L2
chrM:12194G>A, chrM:13013G>A, chrM:15813G>A, chrM:16138T>C, chrM:16187T>C, chrM:1840T>C, chrM:7629G>A, chrM:8644A>G, chrM:9538T>C
L2a'b'c'd
chrM:11367T>C
L2b'c'd
chrM:16142C>T, chrM:1756C>T
L2d-G16129A!
chrM:10378C>T, chrM:10776T>C, chrM:14268C>T, chrM:15200G>C, chrM:15552G>A, chrM:15646T>C, chrM:15723A>G, chrM:15777C>T, chrM:15822A>G, chrM:1583T>C, chrM:16174T>C, chrM:16449C>T, chrM:2677C>A, chrM:2857A>G, chrM:294C>T, chrM:3116G>A, chrM:5654C>T, chrM:8977G>A, chrM:9364A>G
L2d1
chrM:10123A>G
chrM:1647A>G
chrM:1647A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 756709966 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03437.final.cram	CRAM	—	GRCh38	bwa mem	60d94035d63a87a7a9ea95f3a20a34ba	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.