SAMN01090774

EXTERNAL

Sample

Accession

SAMN01090774

Alias

HG03209

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual HG03209

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway L2e

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L2
chrM:12194G>A, chrM:13013G>A, chrM:15813G>A, chrM:16138T>C, chrM:16187T>C, chrM:1840T>C, chrM:7629G>A, chrM:8644A>G, chrM:9538T>C
L2e
chrM:11358T>C, chrM:11612T>C, chrM:13131G>A, chrM:13722T>C, chrM:143G>A, chrM:15120T>C, chrM:15157G>A, chrM:15312T>C, chrM:15534C>A, chrM:15568G>A, chrM:15607C>T, chrM:15662C>T, chrM:15715C>T, chrM:15778C>T, chrM:15822A>G, chrM:15823C>T, chrM:16142C>T, chrM:16187C>T, chrM:16472A>G, chrM:2960A>G, chrM:3985A>G, chrM:4492A>T, chrM:5437T>C, chrM:635G>A, chrM:7806T>C, chrM:8800A>G, chrM:9394C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 739724048 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03209.final.cram	CRAM	—	GRCh38	bwa mem	996c21280b631eff06c3973e97aa3210	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.