SAMN01036828

EXTERNAL

Sample

Accession

SAMN01036828

Alias

HG02728

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG02728

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:2713T>C [Node814]

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M4''67
chrM:11430G>A
M45
chrM:16138T>C, chrM:4157A>G, chrM:8603A>G
chrM:15723A>G
chrM:15723A>G
chrM:2507T>C [Node813]
chrM:14110A>G, chrM:15568G>A, chrM:15739A>G, chrM:2507T>C, chrM:3482C>A, chrM:4742A>G, chrM:5008G>A, chrM:6250T>C, chrM:8518T>C, chrM:8932T>C
chrM:2713T>C [Node814]
chrM:2713T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 892105012 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG02728.final.cram	CRAM	—	GRCh38	bwa mem	0a350639e946db4104f4b7ef49e75860	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.