SAMN01036784

EXTERNAL

Sample

Accession

SAMN01036784

Alias

HG03096

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual HG03096

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:2182A>G

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L1
chrM:13212T>C, chrM:13601T>C, chrM:13983G>A, chrM:15716A>G, chrM:16181A>G, chrM:3089G>A, chrM:6478A>G, chrM:6812T>C
L1c
chrM:10009G>A, chrM:12908A>G, chrM:13423T>A, chrM:14334C>T, chrM:15552G>A, chrM:15717C>T, chrM:15783C>T, chrM:16143C>T, chrM:16178C>A, chrM:16181G>C, chrM:16309G>A, chrM:5374A>G, chrM:5494T>C, chrM:7450G>A, chrM:8495A>G
L1c1'2'4'6
chrM:16190C>T, chrM:16289A>G, chrM:9744T>C
L1c1
chrM:13571A>G, chrM:3219A>T, chrM:3266A>G
L1c1c
chrM:15717C>T, chrM:5690G>A, chrM:7810G>A, chrM:7812A>G, chrM:8656T>C
chrM:133G>A [Node1732]
chrM:10401A>G, chrM:133G>A, chrM:15516T>C, chrM:6570C>T
chrM:2182A>G
chrM:15679C>T, chrM:2182A>G, chrM:4396T>C, chrM:8128T>C, chrM:9172C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 693476980 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG03096.final.cram	CRAM	—	GRCh38	bwa mem	ba330a536deabf738c4948523d1d00eb	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.