SAMN00780015

EXTERNAL

Sample

Accession

SAMN00780015

Alias

HG02697

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG02697

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway R30b1

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R30
chrM:8007G>A
R30b
chrM:16366A>G
R30b1
chrM:10054C>A, chrM:1022G>A, chrM:10432T>C, chrM:11430G>A, chrM:11829G>A, chrM:12659A>G, chrM:13131G>A, chrM:133G>A, chrM:13617C>T, chrM:13728G>A, chrM:14730C>T, chrM:15645C>T, chrM:15721T>C, chrM:15722A>G, chrM:16473T>C, chrM:16540A>G, chrM:3485T>C, chrM:3609C>T, chrM:3648A>G, chrM:5259A>G, chrM:6691T>G, chrM:6913A>G, chrM:8228A>G, chrM:8597T>C, chrM:9430T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 733023908 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG02697.final.cram	CRAM	—	GRCh38	bwa mem	f7a06bfbd8085d48ab8d538931d855d9	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.