SAMN00014396

EXTERNAL

Sample

Accession

SAMN00014396

Alias

HG01551

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG01551

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:2287T>C

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
L3e'i'k'x
chrM:10242A>G
L3e
chrM:13635T>C, chrM:1776T>C
L3e3'4
chrM:174G>A, chrM:4685G>A
L3e4a
chrM:10680C>T, chrM:13172C>T, chrM:15474A>G, chrM:15687C>T, chrM:3338G>A, chrM:5007A>G
chrM:2287T>C
chrM:2287T>C, chrM:6250T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 742044594 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG01551.final.cram	CRAM	—	GRCh38	bwa mem	3c205411975d03bc2be849a8acbb42b5	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.