SAMN00014390

EXTERNAL

Sample

Accession

SAMN00014390

Alias

HG01531

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual HG01531

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway N1b1a

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
N1b1a
chrM:1022G>A, chrM:10785A>G, chrM:1127C>T, chrM:1143G>A, chrM:15568G>A, chrM:15599C>G, chrM:15813G>A, chrM:2063C>T, chrM:3344C>A, chrM:4383C>T, chrM:4894G>A, chrM:7674G>A, chrM:7895C>T, chrM:8259A>G, chrM:8758C>T, chrM:9661T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 727115492 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
HG01531.final.cram	CRAM	—	GRCh38	bwa mem	9a0687943ceb3190ee7130ff3d93c3f9	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.