SAMN00007814
EXTERNALSample
- Accession
SAMN00007814- Alias
- NA19909
- Sex
- Female
- Center
- NYGC
- Description
- Human 1000 genomes individual NA19909
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
chrM:12893A>G [Node1706]
From de-novo tree placement
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L1chrM:13212T>C, chrM:13601T>C, chrM:13983G>A, chrM:15716A>G, chrM:16181A>G, chrM:3089G>A, chrM:6478A>G, chrM:6812T>C
-
L1bchrM:1162T>C, chrM:133G>A, chrM:134T>C, chrM:14192A>G, chrM:14538T>C, chrM:15549T>C, chrM:15687C>T, chrM:15693C>T, chrM:16177G>T, chrM:16187C>T, chrM:16350A>G, chrM:1776T>C, chrM:2192A>G, chrM:2731T>C, chrM:3116G>A, chrM:5971C>T, chrM:6250T>C, chrM:6412A>G, chrM:7290C>T, chrM:7671A>G, chrM:862G>A
-
L1b2chrM:13316A>G, chrM:13746G>A, chrM:15662C>T
-
chrM:11235A>GchrM:11235A>G
-
chrM:5463A>G [Node1704]chrM:13575A>G, chrM:5463A>G
-
chrM:12893A>G [Node1706]chrM:12893A>G, chrM:15715C>T
Origin
No geographic coordinate recorded.
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina NovaSeq 6000 ·
Layout: PAIRED ·
Reads: 729844486 ·
Read length: 150 ·
Date: 2020-05-14
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| NA19909.final.cram | CRAM | — | GRCh38 | bwa mem | d7f71ba733fa9ecff878682de31f43a2 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.