SAMN00004471

EXTERNAL

Sample

Accession

SAMN00004471

Alias

NA19740

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual NA19740

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway A2v1a

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
A
chrM:15713C>T, chrM:15742G>A, chrM:16227A>G, chrM:3671T>C, chrM:4247A>G, chrM:8217C>T, chrM:87A>G
A-T152C!
chrM:15785T>C
A2-x
chrM:11430G>A, chrM:16145A>G, chrM:7450G>A
A2v
chrM:15662C>T
A2v1
chrM:5914C>A
A2v1a
chrM:10800G>A, chrM:6826A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 724221922 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
NA19740.final.cram	CRAM	—	GRCh38	bwa mem	319294405eb462ddaeb40c1073fbc489	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.