SAMN00001678
EXTERNALSample
- Accession
SAMN00001678- Alias
- NA19147
- Sex
- Female
- Center
- NYGC
- Description
- Human 1000 genomes individual NA19147
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
L3e2b6
From de-novo tree placement
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
-
L3e'i'k'xchrM:10242A>G
-
L3echrM:13635T>C, chrM:1776T>C
-
L3e2chrM:14328G>A, chrM:15743C>T, chrM:16187T>C
-
L3e2bchrM:15595T>C
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chrM:16138T>CchrM:16138T>C
-
L3e2b6chrM:15126A>G, chrM:15750C>A, chrM:6793C>T
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina NovaSeq 6000 ·
Layout: PAIRED ·
Reads: 748072728 ·
Read length: 150 ·
Date: 2020-05-14
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| NA19147.final.cram | CRAM | — | GRCh38 | bwa mem | 0fc84db9295c625c6deff1b3aff6ad5d | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.