SAMN00001194

EXTERNAL

Sample

Accession

SAMN00001194

Alias

NA19474

Sex

Female

Center

NYGC

Description

Human 1000 genomes individual NA19474

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway L0b

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0a'b'f'g
chrM:11064A>G, chrM:14559C>T, chrM:14854G>A, chrM:15595T>C, chrM:15942C>T, chrM:16065A>G, chrM:16085A>G, chrM:16187C>T, chrM:1669A>G, chrM:4009T>C, chrM:5026C>T, chrM:9241C>T
L0a'b'g
chrM:15571C>T, chrM:15610T>C, chrM:16228T>C, chrM:7851C>T, chrM:7989A>G
L0b
chrM:11061C>T, chrM:11307A>G, chrM:1143G>A, chrM:13863A>G, chrM:14529G>A, chrM:14667A>G, chrM:147A>G, chrM:15045T>C, chrM:15336C>T, chrM:15474A>G, chrM:15587A>G, chrM:16138T>C, chrM:16181G>A, chrM:16187T>C, chrM:5003T>C, chrM:5671T>C, chrM:6142T>C, chrM:6725T>C, chrM:6760G>A, chrM:6847A>G, chrM:7581A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 753313272 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
NA19474.final.cram	CRAM	—	GRCh38	bwa mem	34761f3e71fef297644205132e95b9f7	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.