SAMN00001183

EXTERNAL

Sample

Accession

SAMN00001183

Alias

NA19461

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual NA19461

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:16187T>C [Node1839]

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L5'7
chrM:15552G>A, chrM:15942C>T, chrM:16187T>C, chrM:2846T>C
L7a1
chrM:10689C>T, chrM:10710T>C, chrM:11232T>C, chrM:1141T>C, chrM:1143G>A, chrM:12473A>G, chrM:12806C>T, chrM:13025T>C, chrM:14659A>G, chrM:14841C>T, chrM:1504T>C, chrM:15677A>G, chrM:15791T>C, chrM:15950C>T, chrM:16174T>C, chrM:16187C>T, chrM:16192A>G, chrM:1908C>T, chrM:2987A>G, chrM:3341G>A, chrM:3515G>A, chrM:4078G>A, chrM:4099C>T, chrM:4390T>C, chrM:5950A>G, chrM:7188A>G, chrM:7212G>A, chrM:8441T>C, chrM:9076T>C, chrM:9524T>C
L7a1a1
chrM:15714C>T
L7a1a1a
chrM:6499A>G
chrM:16187T>C [Node1839]
chrM:16187T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 764022816 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
NA19461.final.cram	CRAM	—	GRCh38	bwa mem	d36b48b0e0f5bdb52c4ebda05104adfe	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.