SAMN00001179

EXTERNAL

Sample

Accession

SAMN00001179

Alias

NA19454

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual NA19454

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway L0f

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0a'b'f'g
chrM:11064A>G, chrM:14559C>T, chrM:14854G>A, chrM:15595T>C, chrM:15942C>T, chrM:16065A>G, chrM:16085A>G, chrM:16187C>T, chrM:1669A>G, chrM:4009T>C, chrM:5026C>T, chrM:9241C>T
L0f
chrM:12893A>G, chrM:13532C>T, chrM:14043C>T, chrM:15275T>C, chrM:15592C>T, chrM:15750C>T, chrM:15791T>C, chrM:16177G>A, chrM:4387C>T, chrM:6571T>C, chrM:9004T>C, chrM:9043C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 743429034 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
NA19454.final.cram	CRAM	—	GRCh38	bwa mem	ac673d34cd4ca48625074317bed3cb19	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.