SAMN00001098

EXTERNAL

Sample

Accession

SAMN00001098

Alias

NA19308

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual NA19308

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:15778C>T

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L5'7
chrM:15552G>A, chrM:15942C>T, chrM:16187T>C, chrM:2846T>C
L5
chrM:15571C>T, chrM:7395A>G
L5a1
chrM:10448T>C, chrM:11304C>T, chrM:1246T>C, chrM:12528A>G, chrM:13145A>G, chrM:133G>A, chrM:13635T>C, chrM:13662C>T, chrM:14004T>C, chrM:14328G>A, chrM:14394T>C, chrM:14640G>A, chrM:15307G>A, chrM:15610T>C, chrM:15734T>C, chrM:275A>G, chrM:354G>A, chrM:3919C>T, chrM:4534C>T, chrM:4570G>A, chrM:5079A>G, chrM:5605G>A, chrM:5720T>C, chrM:6847A>G, chrM:7578G>A, chrM:7611A>G, chrM:8005C>T, chrM:8177C>T, chrM:8728G>A, chrM:8752G>A
chrM:15778C>T
chrM:15778C>T, chrM:15785T>C, chrM:16143C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 1037013396 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
NA19308.final.cram	CRAM	—	GRCh38	bwa mem	70a12aadfb49a11024ece3280569d362	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.