SAMN00000539

EXTERNAL

Sample

Accession

SAMN00000539

Alias

NA19082

Sex

Male

Center

NYGC

Description

Human 1000 genomes individual NA19082

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway N9a2a

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
N9
chrM:4840G>A
N9a
chrM:11781A>G, chrM:11795G>A, chrM:15680C>A, chrM:16142C>T, chrM:4654G>A
N9a2'4'5'11
chrM:15595T>C
chrM:385T>C
chrM:385T>C
N9a2
chrM:14490T>C
N9a2a
chrM:15920A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 700733920 · Read length: 150 · Date: 2020-05-14

File	Format	Size	Reference	Aligner	md5
NA19082.final.cram	CRAM	—	GRCh38	bwa mem	df551992ee2d9690a909f574b6755af1	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.