SAMEA9577593

EXTERNAL

Sample

Accession

SAMEA9577593

Alias

HOP004

Sex

Female

Center

Max Planck Institute for the Science of Human History

Description

HOP004

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway HV

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 4000 · Layout: PAIRED · Reads: 13937341 · Read length: — · Date: 2021-09-08

File	Format	Size	Reference	Aligner	md5
HOP004.A0101.TF1.1.bam	BAM	632.4 MB	—	—	29a46d8da38b9922cd6dd4bd3f609ff2	Download

Instrument: Illumina HiSeq 4000 · Layout: PAIRED · Reads: 135824 · Read length: — · Date: 2021-09-08

File	Format	Size	Reference	Aligner	md5
HOP004.A0101.MT1.1.bam	BAM	3.7 MB	—	—	0f9450ca6234c972bb1ede15e3201a2d	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.