SAMEA8950166

EXTERNAL

Sample

Accession

SAMEA8950166

Alias

KS5

Sex

Female

Center

THE UNIVERSITY OF CHICAGO

Description

aMMD_Kyang

Source publications

Ancient genomes from the Himalayas illuminate the genetic history of Tibetans and their Tibeto-Burman speaking neighbors (2022)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U2b1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U2
chrM:15474A>G
U2b
chrM:11529C>T, chrM:12617G>A, chrM:14472C>T, chrM:16138T>C, chrM:2130G>A, chrM:4609A>T
U2b1
chrM:3338G>A, chrM:3516A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7837496 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182989_1.fastq.gz	FASTQ	181.2 MB	—	—	1f7c48abea55699dd7a53e477662ac55	Download
ERR6182989_2.fastq.gz	FASTQ	185.5 MB	—	—	6c05203f5d26eb9b4c44b579d7b9bd25	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 6787066 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182990_1.fastq.gz	FASTQ	165.8 MB	—	—	627524606c65c33cb33c74c34284bc2c	Download
ERR6182990_2.fastq.gz	FASTQ	168.2 MB	—	—	d96e5d0b6fa3a8af8ad8a8ca885a0e6d	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7191340 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182993_1.fastq.gz	FASTQ	173.5 MB	—	—	6b006c0ca6394f6c06de74634ef24053	Download
ERR6182993_2.fastq.gz	FASTQ	175.8 MB	—	—	6110ecd4ce85ae84c0c22774c99323e8	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 1615531 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182996.fastq.gz	FASTQ	66.5 MB	—	—	3c80aaa070ae9d3d2a2769023671905b	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2514328 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182998.fastq.gz	FASTQ	113.4 MB	—	—	6282e75a1e69f2369c7c2771ba7ee3c4	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7731776 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182987_1.fastq.gz	FASTQ	176.0 MB	—	—	c724ecc5e1188f5a95ba7c691bf224f9	Download
ERR6182987_2.fastq.gz	FASTQ	180.1 MB	—	—	e17ee4515d68d1b349d4bd0d5c976798	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7742608 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182988_1.fastq.gz	FASTQ	179.6 MB	—	—	dd7532f1825708d37ecddd98c187deff	Download
ERR6182988_2.fastq.gz	FASTQ	183.2 MB	—	—	010ec18e3f8a4f1d8ba1761d6628a7eb	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 6485864 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182992_1.fastq.gz	FASTQ	160.2 MB	—	—	9815a0ee3fafc51053ccf8411e5b641f	Download
ERR6182992_2.fastq.gz	FASTQ	162.0 MB	—	—	d8c5404e9be22695c3c23b0777273dd9	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7111240 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182994_1.fastq.gz	FASTQ	171.7 MB	—	—	8ee454414f3601a245fdee3b0ba2997f	Download
ERR6182994_2.fastq.gz	FASTQ	174.0 MB	—	—	f5f19c7d98ecca2ff860c4cd1fc506ab	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 2593942 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182995.fastq.gz	FASTQ	104.4 MB	—	—	001b5062813c4c4082abcd7ef496abb5	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2558635 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182997.fastq.gz	FASTQ	115.7 MB	—	—	b0f0550ece5e0ec99b93b922ce7462e7	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2496851 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6183000.fastq.gz	FASTQ	115.0 MB	—	—	0d0051c6681d625d2a343673203a4321	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7792462 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182986_1.fastq.gz	FASTQ	176.9 MB	—	—	f229451c20e0b7719cd4a09bf431d447	Download
ERR6182986_2.fastq.gz	FASTQ	180.5 MB	—	—	c7d770fc466e4b5735ce0c5773e65bc6	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2545504 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6182999.fastq.gz	FASTQ	117.9 MB	—	—	1b764abd92882f6a7e486851b6bd1111	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.