SAMEA7700405

EXTERNAL

Sample

Accession

SAMEA7700405

Alias

CNE1

Sex

Male

Center

THE UNIVERSITY OF CHICAGO

Description

aMMD_Chokhopani

Source publications

Ancient genomes from the Himalayas illuminate the genetic history of Tibetans and their Tibeto-Burman speaking neighbors (2022)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway A17

Called haplogroup is not yet placed in the tree.

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7460410 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179186_1.fastq.gz	FASTQ	175.9 MB	—	—	2897e8a792753c9d4edacdc137917e10	Download
ERR6179186_2.fastq.gz	FASTQ	179.1 MB	—	—	de97a56fef24359635011ba536c2ea0a	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7178582 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179206_1.fastq.gz	FASTQ	171.0 MB	—	—	cc07d2f8af228a8b959bf255c6dfdf0d	Download
ERR6179206_2.fastq.gz	FASTQ	173.6 MB	—	—	f002a71ef01170f6488d8e2704ac3036	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7852702 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179228_1.fastq.gz	FASTQ	182.5 MB	—	—	c6743f9044e1fc1cd08b74f57885cdb5	Download
ERR6179228_2.fastq.gz	FASTQ	185.7 MB	—	—	1f97930719feb1bf7bfd22b9d0e05db3	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 2547931 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179259.fastq.gz	FASTQ	97.7 MB	—	—	6cb694ed4e1866d77ef14794254be16e	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1047043 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179272.fastq.gz	FASTQ	45.8 MB	—	—	48e15cd4a676af0809a4a966150241f0	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1062468 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179279.fastq.gz	FASTQ	47.8 MB	—	—	108411eb6d5abe4d8fbd8442e382a448	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 8393826 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179080_1.fastq.gz	FASTQ	183.6 MB	—	—	11bf26b82897d99171670823bd920145	Download
ERR6179080_2.fastq.gz	FASTQ	188.3 MB	—	—	68ec496317e7ec7ab8114474e9eb3c23	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 8365562 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179106_1.fastq.gz	FASTQ	183.8 MB	—	—	469131ed8e65e8e3ffb74a91214128d7	Download
ERR6179106_2.fastq.gz	FASTQ	188.9 MB	—	—	26b49286140ea0cd039ce32541526afe	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 8444078 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179162_1.fastq.gz	FASTQ	188.8 MB	—	—	3f5d3feba30c6b8d2b6278007b7e18f0	Download
ERR6179162_2.fastq.gz	FASTQ	194.3 MB	—	—	56f6cb8fb184fe278ef65d84125fdbf1	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 7804710 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179253_1.fastq.gz	FASTQ	181.8 MB	—	—	35817e3267aeff89baedf5d45c718611	Download
ERR6179253_2.fastq.gz	FASTQ	184.9 MB	—	—	8bc2e29b17c934bd1ed5263da94c94a9	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1063934 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179271.fastq.gz	FASTQ	46.6 MB	—	—	4e8e956b6492ce8e1705c75bdf460af1	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1037997 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179285.fastq.gz	FASTQ	46.5 MB	—	—	0390b372c9cd88160b873bc2d4291bc4	Download

Instrument: NextSeq 500 · Layout: PAIRED · Reads: 8336414 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179133_1.fastq.gz	FASTQ	186.7 MB	—	—	0d44aff3b17b9a45ac37331e54ab8259	Download
ERR6179133_2.fastq.gz	FASTQ	191.5 MB	—	—	c66ff4a1c75be16ddc1a465ba363cec3	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 1466501 · Read length: — · Date: 2022-01-05

File	Format	Size	Reference	Aligner	md5
ERR6179264.fastq.gz	FASTQ	58.0 MB	—	—	a9016f2c3bfcc0007005fe27d66667a3	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.