SAMEA7600832

EXTERNAL

Sample

Accession

SAMEA7600832

Alias

ROUQV

Sex

Female

Center

CNRS UMR 5288

Description

Ancient Human individual from the 'Grotte du Rouquet' cave

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H3

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H3
chrM:6199T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 4264520 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863278_1.fastq.gz	FASTQ	128.3 MB	—	—	193d32c7163786413bea94377f98f4ba	Download
ERR4863278_2.fastq.gz	FASTQ	155.5 MB	—	—	51618ed26d36dc89ea2d7417ae34dbe8	Download

Instrument: Illumina MiniSeq · Layout: PAIRED · Reads: 137784 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863279_1.fastq.gz	FASTQ	3.1 MB	—	—	29d51c3565b6cbb0d173175a950d8de4	Download
ERR4863279_2.fastq.gz	FASTQ	3.2 MB	—	—	81545dcedee593d76ee4ad99eb4941a4	Download

Instrument: Illumina MiniSeq · Layout: PAIRED · Reads: 226160 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863281_1.fastq.gz	FASTQ	4.9 MB	—	—	4aca29edd6ec4cba67dc5710da7655df	Download
ERR4863281_2.fastq.gz	FASTQ	5.2 MB	—	—	54084bd57e889e9ff6e22bbfe5ad36f3	Download

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 57453728 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295811.fastq.gz	FASTQ	1.9 GB	—	—	538e88a310ddd589faffb7d0aff13866	Download

Instrument: Illumina MiniSeq · Layout: SINGLE · Reads: 1306675 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295814.fastq.gz	FASTQ	44.5 MB	—	—	09a9512b67c641f291c585e1f8b1af21	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 5224978 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863280_1.fastq.gz	FASTQ	144.7 MB	—	—	40ce2dceb63429dff4aebbe6de16a719	Download
ERR4863280_2.fastq.gz	FASTQ	184.1 MB	—	—	1d6eea984cca8669689875ec23c30ddf	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 5672304 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863282_1.fastq.gz	FASTQ	148.7 MB	—	—	db2012a805d8e70f77835e34ef2861ce	Download
ERR4863282_2.fastq.gz	FASTQ	188.3 MB	—	—	c218da7b9f2bad4911ef457a0d9bb539	Download

Instrument: Illumina MiniSeq · Layout: SINGLE · Reads: 1013255 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295812.fastq.gz	FASTQ	33.6 MB	—	—	b1bd55158586864568689b8e7be1b995	Download

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 55907848 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295813.fastq.gz	FASTQ	1.8 GB	—	—	6d6c5abc42551540b358057726219018	Download

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 34258820 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295815.fastq.gz	FASTQ	1.1 GB	—	—	edbf9489c36daf62391cd2ce38eb7ebf	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.