SAMEA7600829

EXTERNAL

Sample

Accession

SAMEA7600829

Alias

ROUQW

Sex

Male

Center

CNRS UMR 5288

Description

Ancient Human individual from the 'Grotte du Rouquet' cave

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway X2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
X2
chrM:1143G>A, chrM:13389A>G, chrM:13893T>C, chrM:15701C>T, chrM:5644T>C, chrM:5794C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 34618720 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295817.fastq.gz	FASTQ	1.2 GB	—	—	7e5e9abf6fadf355cce2e6d332ba3958	Download

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 40435507 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295818.fastq.gz	FASTQ	1.4 GB	—	—	275e7cd263679a8e805215e58e12a7ad	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 4848666 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863284_1.fastq.gz	FASTQ	128.3 MB	—	—	2e57162ff9da112a36b2ff467a385fdc	Download
ERR4863284_2.fastq.gz	FASTQ	163.9 MB	—	—	77ee268cc7f275069129502eeeec591d	Download

Instrument: Illumina MiniSeq · Layout: SINGLE · Reads: 1048720 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295816.fastq.gz	FASTQ	34.9 MB	—	—	a616ef74261c866638af6499b82cc4af	Download

Instrument: Illumina MiniSeq · Layout: PAIRED · Reads: 242592 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863283_1.fastq.gz	FASTQ	5.0 MB	—	—	467f8029c4aaa129c626f4e8bb2cb0e3	Download
ERR4863283_2.fastq.gz	FASTQ	5.3 MB	—	—	f96716b004b1378243a938a55f4e9eba	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 4834834 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863285_1.fastq.gz	FASTQ	147.6 MB	—	—	f9c04903b80e265390c164854e069983	Download
ERR4863285_2.fastq.gz	FASTQ	181.1 MB	—	—	dd9dddc6f41832d3d7aabd0286df6bb6	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.