SAMEA7600820

EXTERNAL

Sample

Accession

SAMEA7600820

Alias

1H13

Sex

Male

Center

CNRS UMR 5288

Description

Ancient Human individual from the Late Neolithic Mont-Aimé-I hypogeum

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway K1a4a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U8
chrM:9121T>C
U8b
chrM:13590C>T, chrM:2903A>G, chrM:8478G>A
K
chrM:10722T>C, chrM:14221T>C, chrM:15647T>C, chrM:15734T>C, chrM:9973A>G
K1
chrM:613T>C, chrM:9821A>G
K1a
chrM:16490C>T
K1a4
chrM:10908T>C
K1a4a1
chrM:11263C>T, chrM:13163T>C, chrM:5683G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina MiniSeq · Layout: PAIRED · Reads: 414090 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863214_1.fastq.gz	FASTQ	9.7 MB	—	—	1d266271ff41f77431c11096e53bcb2e	Download
ERR4863214_2.fastq.gz	FASTQ	9.9 MB	—	—	51e6cd0b80cdb0119c2ab54f899abdcd	Download

Instrument: Illumina MiniSeq · Layout: SINGLE · Reads: 967788 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295747.fastq.gz	FASTQ	40.3 MB	—	—	61018d5d4dac1c513cfd8dfeffdaaba5	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 3671848 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863213_1.fastq.gz	FASTQ	121.1 MB	—	—	e7b03407f6bf8b6d85895c81774cda01	Download
ERR4863213_2.fastq.gz	FASTQ	144.3 MB	—	—	a7b017f4512b7c83ed7c240316c1787b	Download

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 39694572 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295748.fastq.gz	FASTQ	1.7 GB	—	—	69bcc57882ace8958ef0f724c77b68e5	Download

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 8121438 · Read length: — · Date: 2021-01-13

File	Format	Size	Reference	Aligner	md5
ERR4863215_1.fastq.gz	FASTQ	238.5 MB	—	—	5bf57a9b3cb5e12825489b5e5f20b30d	Download
ERR4863215_2.fastq.gz	FASTQ	295.8 MB	—	—	eaaf17e1ec714a69682c4dfe114bf097	Download

Instrument: Illumina NovaSeq 6000 · Layout: SINGLE · Reads: 24854924 · Read length: — · Date: 2021-02-13

File	Format	Size	Reference	Aligner	md5
ERR5295746.fastq.gz	FASTQ	1.1 GB	—	—	5634bfada357b2ee4f89c165228bde73	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.