SAMEA7583117
EXTERNALSample
- Accession
SAMEA7583117- Alias
- RBC2
- Sex
- Female
- Center
- MPI-EVA
- Description
- Ritidian Beach Cave individual 2
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
No haplogroup call for this sample.
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 20602175 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7642_nuclear.bam | BAM | 4.9 GB | — | — | b81e5114a59a1d9a23a93289c9a57361 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 21370436 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7643_nuclear.bam | BAM | 5.0 GB | — | — | 8a5e0437be0e2f1b734a00f7325b97e7 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 9709110 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7644_shotgun.bam | BAM | 2.2 GB | — | — | 779d1bfd4b07e56d21695d3fd299242d | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 23358018 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7645_nuclear.bam | BAM | 5.5 GB | — | — | 22b552b5d8511a6d4f925c76527e95e4 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2168836 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8862_shotgun.bam | BAM | 497.9 MB | — | — | 276abcd52b67bb798b64c184bb34699c | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2262877 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8864_shotgun.bam | BAM | 520.7 MB | — | — | bb250c40825ea238139f4ed585c4c13f | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 37676787 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8864_nuclear.bam | BAM | 8.9 GB | — | — | a49f06ba7f0856d6289cbc5efbd00fd0 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2132198 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8865_shotgun.bam | BAM | 495.4 MB | — | — | 817fcaa10e5db8624d03497bf0ed5ac0 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 1634842 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8866_shotgun.bam | BAM | 380.6 MB | — | — | b6b617c1a44c56a644b336193b3b2639 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 595311 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5061_MT.bam | BAM | 133.1 MB | — | — | b1f2c074db0c44595e2a32b4aded3c71 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 481190 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5062_MT.bam | BAM | 108.8 MB | — | — | 838f69c46ac31a372fe0ef687469b087 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 4312228 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| D5865_shotgun.bam | BAM | 1.0 GB | — | — | 0108b36fc0a7be9dcee46e9d3d6caf28 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 559867 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| D5865_MT.bam | BAM | 122.9 MB | — | — | 5c3c5383e7a7182b44ea208375bfd2b7 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 21170900 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| D5865_nuclear.bam | BAM | 4.9 GB | — | — | 45f1bf6cf43333306adb9f33d548dd5d | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 7778014 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7643_shotgun.bam | BAM | 1.7 GB | — | — | c18903f0530625ae8fdf45a73bf9adb7 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 22356090 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7644_nuclear.bam | BAM | 5.3 GB | — | — | 1bd0ca36f5ce5036c05596c401ef9a7b | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 9239931 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7645_shotgun.bam | BAM | 2.1 GB | — | — | b5d543916ffd85cbfd7141cb899977e9 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 36625663 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8862_nuclear.bam | BAM | 8.5 GB | — | — | e5d8574c95469d64a776e101f67d3a00 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 34954891 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8863_nuclear.bam | BAM | 8.2 GB | — | — | 638af0dc407853f250961e473509ee3b | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 37073545 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8865_nuclear.bam | BAM | 8.8 GB | — | — | c998c9d3524dbb5848f328a2485d5e0b | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 642966 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5063_MT.bam | BAM | 146.0 MB | — | — | 35b7f2b42b049c92ea9711022e47dedf | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 7542167 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7642_shotgun.bam | BAM | 1.7 GB | — | — | 3109250c97e5ea1946c9e822ccf68324 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2246107 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8863_shotgun.bam | BAM | 516.9 MB | — | — | b75e766c834ce615e51e42b7aba9d84a | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 27035512 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8866_nuclear.bam | BAM | 6.4 GB | — | — | 5fe6eeef35b5df8c7f47518aef707939 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 1884888 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8867_shotgun.bam | BAM | 438.0 MB | — | — | 833c380a2fd89b9ab6d56e020b24b6b0 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 32124396 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8867_nuclear.bam | BAM | 7.6 GB | — | — | cbfeaf55b2d6caae92020d7e3f1d4b89 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 509622 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5060_MT.bam | BAM | 115.9 MB | — | — | 3d179de4b3a13eb0325fd6dee8b0aed4 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.