SAMEA7583116
EXTERNALSample
- Accession
SAMEA7583116- Alias
- RBC1
- Sex
- Male
- Center
- MPI-EVA
- Description
- Ritidian Beach Cave individual 1
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
No haplogroup call for this sample.
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 4257764 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| D5864_shotgun.bam | BAM | 1016.7 MB | — | — | 801b71df371f29595c03fc28f6b70ae3 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 10074521 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7639_shotgun.bam | BAM | 2.3 GB | — | — | dc489843ea7bca17d97f1af2bfae6f9d | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 22839157 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7641_nuclear.bam | BAM | 5.4 GB | — | — | a1ddc2c20038d29ceeca4dc3d558f22d | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2507843 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8851_shotgun.bam | BAM | 579.4 MB | — | — | 8c35034ad6678b55829a2d799cdb6137 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 20615892 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| D5864_nuclear.bam | BAM | 4.8 GB | — | — | 9a81e4944e7afde9509275491580ddf3 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 24440456 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7638_nuclear.bam | BAM | 5.7 GB | — | — | e0c35ad9e6cfde2f8261c7654615bb22 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 31143044 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8852_nuclear.bam | BAM | 7.3 GB | — | — | 58bf737390df9801c849adf8b548a7d5 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 1881857 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8854_shotgun.bam | BAM | 437.5 MB | — | — | 835050941f3e0221ebb939ad16f55dc5 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 8548975 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7640_shotgun.bam | BAM | 1.9 GB | — | — | 24a850e32ecc8b5c8e4e2fb6305f2571 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 21808047 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7640_nuclear.bam | BAM | 5.2 GB | — | — | ff503760651460042771fdc0977736e7 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2284254 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8855_shotgun.bam | BAM | 531.9 MB | — | — | 9e0260dcdeef15ba72484d05d4cbbf53 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2169805 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8852_shotgun.bam | BAM | 501.9 MB | — | — | e233447727ef5e7c2b24de6ae8b668e1 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 42241317 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8855_nuclear.bam | BAM | 9.9 GB | — | — | 785f41662a9dba65e4e2f0ad7b06cf7e | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2345182 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8856_shotgun.bam | BAM | 543.8 MB | — | — | 074355836872480d8426c4c445eda6e5 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 29203796 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8858_nuclear.bam | BAM | 6.9 GB | — | — | b2cbc6c5400ee0fb62b04f61a86d2771 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 34521195 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8856_nuclear.bam | BAM | 8.1 GB | — | — | e46102d12db96d6eca80709731ce83c5 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 30032941 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8857_nuclear.bam | BAM | 7.1 GB | — | — | 361b07c8f17468e30f5c090deb2eefbf | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 782127 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5057_MT.bam | BAM | 178.8 MB | — | — | 7ed3025d6cc4ddca75ea7b3518d62cda | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 592839 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5058_MT.bam | BAM | 134.0 MB | — | — | 3f4082a57921cbe1fd6dd6ffe5ce6a32 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 465368 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| D5864_MT.bam | BAM | 103.2 MB | — | — | 6de80df1397a8ef54bcd971546801f8c | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 10959816 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7638_shotgun.bam | BAM | 2.4 GB | — | — | 195c35664d4e8811126a87a325606b15 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 23591274 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7639_nuclear.bam | BAM | 5.6 GB | — | — | 72320f806b7ce52d5a0ed76d51df8b9b | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 7514395 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F7641_shotgun.bam | BAM | 1.7 GB | — | — | af6e7add3cdab8946c050b0a42cf3bef | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 31487971 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8851_nuclear.bam | BAM | 7.4 GB | — | — | 1fbce9baddcf9dce545c62d34c42c697 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 1950432 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8853_shotgun.bam | BAM | 440.5 MB | — | — | 380facb6af4c30075db4effa730fb923 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 38365130 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8853_nuclear.bam | BAM | 8.9 GB | — | — | 9f2c1c1ee2fc8ac3198e21351ccb5a92 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 30221787 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8854_nuclear.bam | BAM | 7.1 GB | — | — | c1aa65a271386c8f59251d6380195d62 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2114162 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8857_shotgun.bam | BAM | 494.8 MB | — | — | f651da131c0a79652c6b2cbbe2144fb6 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 2109473 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F8858_shotgun.bam | BAM | 493.2 MB | — | — | e6150af1f279c9ab34e0334752a407dc | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 656099 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5056_MT.bam | BAM | 145.7 MB | — | — | e17cd8431abc2276235e832432c7a546 | Download |
Instrument: Illumina HiSeq 2500 ·
Layout: PAIRED ·
Reads: 651409 ·
Read length: — ·
Date: 2020-12-07
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| F5059_MT.bam | BAM | 146.0 MB | — | — | b7930bb2a4dc5843d604b19e980bc851 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.