SAMEA6864158

EXTERNAL

Sample

Accession

SAMEA6864158

Alias

I2238

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Human_DNA

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway D1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
D
chrM:15785T>C, chrM:4306C>T, chrM:4601C>A
D4
chrM:14091C>T, chrM:2434G>A, chrM:7837C>T
D1
chrM:1516C>T, chrM:15748T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 286001 · Read length: — · Date: 2020-05-29

File	Format	Size	Reference	Aligner	md5
I2238_1240K.bam	BAM	17.2 MB	—	—	aa1c04130f8c1f02808ac89b816679a4	Download

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 59734 · Read length: — · Date: 2020-05-29

File	Format	Size	Reference	Aligner	md5
I2238_mt.bam	BAM	1.9 MB	—	—	591488c906aadaa70405228cd8be37f6	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.