SAMEA6864144

EXTERNAL

Sample

Accession

SAMEA6864144

Alias

I0977

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Human_DNA

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway C1c

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
CZ
chrM:14910A>T, chrM:15721T>C, chrM:4138A>G, chrM:6619C>A, chrM:8007G>A
C1
chrM:11337G>A, chrM:12686A>G, chrM:13741T>C, chrM:15748T>C, chrM:2975T>A, chrM:8968A>G
C1c
chrM:1312G>A, chrM:15353G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 411655 · Read length: — · Date: 2020-05-29

File	Format	Size	Reference	Aligner	md5
I0977_1240K.bam	BAM	26.0 MB	—	—	baa55367ed213cebc23ad507e2a6dffe	Download

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 44517 · Read length: — · Date: 2020-05-29

File	Format	Size	Reference	Aligner	md5
I0977_mt.bam	BAM	1.6 MB	—	—	aef1c403b21007813beb377be1ffd64e	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.