SAMEA6678506

EXTERNAL

Sample

Accession

SAMEA6678506

Alias

ART005

Sex

Female

Center

Max Planck Institute for the Science of Human History

Description

ART005

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway J1c

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R2'JT
JT
chrM:10674A>G, chrM:14875C>A, chrM:15549T>C, chrM:3639T>C
J
chrM:12035A>G, chrM:13131G>A, chrM:15492C>T, chrM:15942C>T, chrM:16287C>T, chrM:16482T>C, chrM:9821A>G
J1
chrM:16455C>T, chrM:2434G>A
J1c
chrM:14221T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 1537997 · Read length: — · Date: 2020-05-27

File	Format	Size	Reference	Aligner	md5
ART005.1240K.PE.bam	BAM	74.4 MB	—	—	96b19cde7931effb69157f24ec9430b3	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1461238 · Read length: — · Date: 2020-05-27

File	Format	Size	Reference	Aligner	md5
ART005.1240K.SR.bam	BAM	81.1 MB	—	—	e0cca9c3a26b99aaf34e9f3090bc1270	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 77837 · Read length: — · Date: 2020-05-27

File	Format	Size	Reference	Aligner	md5
ART005.mito.bam	BAM	2.2 MB	—	—	d49dbd4ee2b895a2c41eb5ed1cce58ad	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.