SAMEA6604213
EXTERNALSample
- Accession
SAMEA6604213- Alias
- NA19202
- Center
- NYGC
- Description
- 30X whole genome sequencing coverage of 698 samples to complete trios in Phase 3 1000 Genome sample set
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
chrM:2739G>A
From de-novo tree placement
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L1'2'3'4'5'6'7chrM:16181G>A
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L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
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L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
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L2chrM:12194G>A, chrM:13013G>A, chrM:15813G>A, chrM:16138T>C, chrM:16187T>C, chrM:1840T>C, chrM:7629G>A, chrM:8644A>G, chrM:9538T>C
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L2echrM:11358T>C, chrM:11612T>C, chrM:13131G>A, chrM:13722T>C, chrM:143G>A, chrM:15120T>C, chrM:15157G>A, chrM:15312T>C, chrM:15534C>A, chrM:15568G>A, chrM:15607C>T, chrM:15662C>T, chrM:15715C>T, chrM:15778C>T, chrM:15822A>G, chrM:15823C>T, chrM:16142C>T, chrM:16187C>T, chrM:16472A>G, chrM:2960A>G, chrM:3985A>G, chrM:4492A>T, chrM:5437T>C, chrM:635G>A, chrM:7806T>C, chrM:8800A>G, chrM:9394C>T
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L2e1chrM:378C>T
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chrM:2739G>AchrM:12779T>C, chrM:13061A>G, chrM:15015A>G, chrM:16196T>C, chrM:2739G>A, chrM:5644T>C, chrM:8586G>A
Origin
No geographic coordinate recorded.
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina NovaSeq 6000 ·
Layout: PAIRED ·
Reads: 690234294 ·
Read length: — ·
Date: 2020-04-21
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| NA19202.final.cram | CRAM | 13.5 GB | — | — | 99edc1557e063b2d75de45f99ac24ca8 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.