SAMEA6604068

EXTERNAL

Sample

Accession: SAMEA6604068
Alias: HG04192
Center: NYGC
Description: 30X whole genome sequencing coverage of 698 samples to complete trios in Phase 3 1000 Genome sample set

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:954A>C

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
N8
chrM:13133A>G, chrM:14634C>T, chrM:14868T>C, chrM:15697G>A, chrM:15734T>C, chrM:15766A>G, chrM:15780T>C, chrM:2184A>G, chrM:2451T>C, chrM:7308T>C, chrM:7384T>C, chrM:7611A>G
chrM:954A>C
chrM:14167C>T, chrM:15518C>T, chrM:15646T>C, chrM:3575C>T, chrM:5476C>T, chrM:5915C>T, chrM:954A>C

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 721031232 · Read length: — · Date: 2020-04-21

File	Format	Size	Reference	Aligner	md5
HG04192.final.cram	CRAM	14.8 GB	—	—	334f1f509bd933b8d7f04f8c5d26af9a	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.