SAMEA6604000

EXTERNAL

Sample

Accession: SAMEA6604000
Alias: HG03620
Center: NYGC
Description: 30X whole genome sequencing coverage of 698 samples to complete trios in Phase 3 1000 Genome sample set

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U2c1b

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U2
chrM:15474A>G
U2c
chrM:14358T>C, chrM:14484A>G, chrM:15657C>T, chrM:5213C>A
U2c1
chrM:7446T>C, chrM:8099C>T, chrM:9190C>T
U2c1b
chrM:1022G>A, chrM:10233C>T, chrM:11313A>G, chrM:11595A>G, chrM:133G>A, chrM:14637T>C, chrM:16138T>C, chrM:4144A>G, chrM:68A>G

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 750653512 · Read length: — · Date: 2020-04-21

File	Format	Size	Reference	Aligner	md5
HG03620.final.cram	CRAM	14.2 GB	—	—	7493aadbc6895fa3035edb7cbb0296ff	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.