SAMEA6603623

EXTERNAL

Sample

Accession: SAMEA6603623
Alias: HG00655
Center: NYGC
Description: 30X whole genome sequencing coverage of 698 samples to complete trios in Phase 3 1000 Genome sample set

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway chrM:6430C>T

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
B4
chrM:15640T>C
B4-C16261T
chrM:15684C>T
B4h
chrM:12692A>G, chrM:15552G>A, chrM:4516T>C
chrM:9430T>C
chrM:9430T>C
chrM:6430C>T
chrM:15042C>T, chrM:16264A>G, chrM:6430C>T

Origin

No geographic coordinate recorded.

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina NovaSeq 6000 · Layout: PAIRED · Reads: 759136670 · Read length: — · Date: 2020-04-21

File	Format	Size	Reference	Aligner	md5
HG00655.final.cram	CRAM	14.2 GB	—	—	1b365dd9af5322bb5c790b5d06a0e493	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.