SAMEA6599757

EXTERNAL

Sample

Accession

SAMEA6599757

Alias

STB002

Sex

Female

Center

Max Planck Institute for the Science of Human History

Description

STB002

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway G2a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
G
chrM:13992G>A, chrM:15785T>C, chrM:4256A>G, chrM:4531T>C
G2
chrM:12986A>G, chrM:5024C>T
G2a'c
chrM:8998G>A
G2a
chrM:15650A>G, chrM:15701C>T, chrM:7023G>A, chrM:8800A>G
G2a1
chrM:13623T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 95216 · Read length: — · Date: 2020-05-21

File	Format	Size	Reference	Aligner	md5
STB002.A0101.MT.bam	BAM	2.8 MB	—	—	79c431904e30514ff486485fac6b22ff	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 7869303 · Read length: — · Date: 2020-05-21

File	Format	Size	Reference	Aligner	md5
STB002.A0101.1240K.bam	BAM	388.5 MB	—	—	c3bf2eef03f9cd931236a3ab75f35437	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 27816589 · Read length: — · Date: 2020-05-21

File	Format	Size	Reference	Aligner	md5
STB002.A0101.SG.bam	BAM	1.3 GB	—	—	36ffc157306baa63151f077a4d9d69cc	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.