SAMEA6490868

EXTERNAL

Sample

Accession

SAMEA6490868

Alias

PLTM310

Sex

Female

Center

Jilin University

Description

PLTM310

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway D4b1a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
D
chrM:15785T>C, chrM:4306C>T, chrM:4601C>A
D4
chrM:14091C>T, chrM:2434G>A, chrM:7837C>T
D4b
chrM:7443G>A
D4b1
chrM:14863T>C, chrM:15374A>G, chrM:15742G>A, chrM:9604C>T
D4b1a
chrM:14350A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: HiSeq X Ten · Layout: SINGLE · Reads: 101591310 · Read length: — · Date: 2020-04-14

File	Format	Size	Reference	Aligner	md5
PLTM310.q30.autosome.bam	BAM	4.3 GB	—	—	d4034c0c866605f4e1ead8893c86dc58	Download

Instrument: HiSeq X Ten · Layout: PAIRED · Reads: 107954777 · Read length: — · Date: 2021-08-15

File	Format	Size	Reference	Aligner	md5
PLTM310.merged.fixedHeader.rmdup.sorted.q30.bam	BAM	4.5 GB	—	—	71623918c1895e5e038ca59ebac9cb3a	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.