SAMEA5953022

EXTERNAL

Sample

Accession

SAMEA5953022

Alias

OTTM_154

Sex

Male

Center

Max Planck Institute for the Science of Human History

Description

OTTM_154

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H3

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H3
chrM:6199T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 5951 · Read length: — · Date: 2019-10-10

File	Format	Size	Reference	Aligner	md5
OOH023.A0102.SG.trim.bam	BAM	254.6 KB	—	—	45b30b1cbe38515abe0cff6ae9439657	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 2895 · Read length: — · Date: 2019-10-10

File	Format	Size	Reference	Aligner	md5
OOH023.A0101.SG.trim.bam	BAM	153.5 KB	—	—	0250577a1ae9aab652cc3a4cf5027f6f	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 154164 · Read length: — · Date: 2019-10-10

File	Format	Size	Reference	Aligner	md5
OOH023.A0102.trim.bam	BAM	7.2 MB	—	—	541a379eedf17c947e2f1754f3960a30	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 26858 · Read length: — · Date: 2019-10-10

File	Format	Size	Reference	Aligner	md5
OOH023.A0101.trim.bam	BAM	1.3 MB	—	—	22fba878cefde951f09979a463160b50	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.