SAMEA5953008
EXTERNALSample
- Accession
SAMEA5953008- Alias
- OBKR_86
- Sex
- Male
- Center
- Max Planck Institute for the Science of Human History
- Description
- OBKR_86
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
K1a3
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
-
NchrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
-
RchrM:15646T>C
-
UchrM:10890A>G, chrM:11731A>G, chrM:11795G>A
-
U2'3'4'7'8'9chrM:1235A>G
-
U8chrM:9121T>C
-
U8bchrM:13590C>T, chrM:2903A>G, chrM:8478G>A
-
KchrM:10722T>C, chrM:14221T>C, chrM:15647T>C, chrM:15734T>C, chrM:9973A>G
-
K1chrM:613T>C, chrM:9821A>G
-
K1achrM:16490C>T
-
K1a3chrM:12540A>G, chrM:13131G>A, chrM:16143C>T
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 20591 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| Sample_ABI948_86OK.PMD.trim.bam | BAM | 1.1 MB | — | — | 0bd415b0e0709dd5a02c2bad3e595eae | Download |
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 59496 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| OBK002.A0101.PMD.trim.bam | BAM | 3.1 MB | — | — | d2fca7c50f011bdbdd942c8e9c5b817b | Download |
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 2193 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| OBK002.A0101_S0_L002_R1_001.fastq.truncated.mapped.mappedonly.sorted.qF.sorted.cleaned_rmdup.sorted.PMD.trim.bam | BAM | 113.6 KB | — | — | 9dfc95040b88f40a0ea102c596e448cf | Download |
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 51398 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| ABI948_86OK_HS.PMD.trim.bam | BAM | 2.8 MB | — | — | 174e23aac59785cb66c0278095c1b8af | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.