SAMEA5952956
EXTERNALSample
- Accession
SAMEA5952956- Alias
- AITI_33
- Sex
- Male
- Center
- Max Planck Institute for the Science of Human History
- Description
- AITI_33
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
H2a2a1
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
-
NchrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
-
RchrM:15646T>C
-
HVchrM:11142A>G, chrM:14189T>C
-
HchrM:2130G>A, chrM:6451T>C
-
H2chrM:862G>A
-
H2achrM:4192G>A
-
H2a2chrM:174G>A
-
H2a2achrM:14749G>A, chrM:15552G>A, chrM:8283G>A
-
H2a2a1chrM:16255G>A
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 10131 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| KLE009.A0102.PMD.trim.bam | BAM | 546.1 KB | — | — | 465fdcb78c83d9c3608e305a5646d0c2 | Download |
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 310 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| KLE009.A0102_S0_L002_R1_001.fastq.truncated.mapped.mappedonly.sorted.qF.sorted.cleaned_rmdup.sorted.PMD.trim.bam | BAM | 16.6 KB | — | — | 73f5fc8e940d191282918f42ba0fb002 | Download |
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 646 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| KLE009.A0101_S0_L007_R1_001.fastq.truncated.mapped.mappedonly.sorted.qF.sorted.cleaned_rmdup.sorted.PMDnonUDG.trim.bam | BAM | 34.4 KB | — | — | c31bfe8b3217d8ef4f42510945755562 | Download |
Instrument: Illumina HiSeq 4000 ·
Layout: SINGLE ·
Reads: 3274 ·
Read length: — ·
Date: 2019-10-10
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| KLE009.A0101.PMDnonUDG.trim.bam | BAM | 177.7 KB | — | — | ce5e09511f7cde637fecc53038e45343 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.