SAMEA5882443

EXTERNAL

Sample

Accession

SAMEA5882443

Alias

pcw070

Sex

Male

Center

STOCKHOLM UNIVERSITY

Description

Human ancient genome

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway I2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
N1a1'2
chrM:1143G>A, chrM:13203A>G, chrM:16196T>C, chrM:9661T>C
I
chrM:14466G>A, chrM:15347A>G, chrM:15552G>A, chrM:15814G>A, chrM:16242T>C, chrM:3952A>T, chrM:7674G>A, chrM:9457T>C
I2
chrM:15181A>G, chrM:16199G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: HiSeq X Ten · Layout: SINGLE · Reads: 31561268 · Read length: — · Date: 2020-04-18

File	Format	Size	Reference	Aligner	md5
pcw070_2bams_merged.180521.hs37d5.fa.cons.90perc.bam	BAM	2.0 GB	—	—	12636c826524a58e5aee5ece90838139	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.