SAMEA5770323

EXTERNAL

Sample

Accession

SAMEA5770323

Alias

R969

Sex

Male

Center

STANFORD SCHOOL OF MEDICINE

Description

DNA extracted from the petrous bone of an individual (sample R969) buried in Tivoli Palazzo Cianti, Italy and dated to 1600-1700CE (Medieval/EarlyModern). The sample was whole genome sequenced to 2.38x. 70.13% of DNA extracted from the sample was human (mapped to hg19).

Source publications

Ancient Rome: A genetic crossroads of Europe and the Mediterranean (2019)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U5b

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U5
chrM:13040T>C, chrM:15693C>T
U5a'b
chrM:2620T>C, chrM:8900G>A
U5b
chrM:13605T>C, chrM:16142C>T, chrM:7191A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: unspecified · Layout: SINGLE · Reads: 140295940 · Read length: — · Date: 2019-11-05

File	Format	Size	Reference	Aligner	md5
R969.bam	BAM	6.3 GB	—	—	1f97a77ac8aa03ad52ce25c5bfbaf2ec	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.