SAMEA5770269

EXTERNAL

Sample

Accession

SAMEA5770269

Alias

R1545

Sex

Male

Center

STANFORD SCHOOL OF MEDICINE

Description

DNA extracted from the petrous bone of an individual (sample R1545) buried in Mazzano Romano, Italy and dated to 1-400CE (Imperial). The sample was whole genome sequenced to 1.52x. 32.19% of DNA extracted from the sample was human (mapped to hg19).

Source publications

Ancient Rome: A genetic crossroads of Europe and the Mediterranean (2019)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H8c

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H-T195C!
chrM:16187T>C
H-T195C!-T146C!
chrM:16138T>C
H8
chrM:12524A>C, chrM:133G>A, chrM:15785T>C
H8c
chrM:13134G>A, chrM:15711T>C, chrM:15942C>T, chrM:16106C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: unspecified · Layout: SINGLE · Reads: 95052186 · Read length: — · Date: 2019-11-05

File	Format	Size	Reference	Aligner	md5
R1545.bam	BAM	4.1 GB	—	—	ccb10924a9c41e37d99e5489b3e1645a	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.